Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015892115.1_cds_XP_016447015.1_41817
CDS Infomation

[gene=LOC107772045] [db_xref=GeneID:107772045] [protein=protein RRNAD1-like isoform X3] [protein_id=XP_016447015.1] [location=join(63473..63598,63716..63811,68735..68815,69729..69803,70331..70411,70953..71092,72101..72352,72726..72900,73038..73121,73280..73412,73767..73960,74497..74499)] [gbkey=CDS]
Sequence

ATGGCTGAGAAGTGCAAGTATTCTTGCAAGACTGCTAGTGAAACCCTAGAATGGATTCAT
GCAATTATCCACTTCATATCACCCTACCGTTATTTCTTAGATGCTCATGTCGTCAATTTC
TTCAAGGATAGACTATGGGAAGCAGTTGATAAAGAGTGGATGCATTGTTTACGGAAGGAG
CCTGTTGAAAATCTTCTCCGAATTCCTTCTGGTGTCGTTCAGGGTCACTGGCCTGTTTCA
CTTAAGGAATTCATCCTTACTCTGAGGTCTCTTTCTCTTCCACGTGAAAAGACAGATTTG
CAGGAATTTTCAGGAATGCACATAGCTTCACTAAGTAATGTTTTAGCTCAAGGCATGAAT
CATAAGAAAAAGCATGAAGTAGAAGCCCTTGCTGCCCTGGTCGGTTTAGTTGCAAAGCAA
GTTGGAGCACAGACAGTTGTTGATGTTGGTGCTGGACAGGGTTATCTTGCTCAAGTGCTT
GCCTTTGAGTACCAGCTTTCTGTAATTGCCATTGATGCTTGTTCACATCATGGTAAGATT
ACTGATGCACGTGCGGAGCGAATCAGGAAGCACTATGCAGCTAAGATGCGTAAAAATGGC
TCCGAACTTAGAGAGATTAGCATGCCAAAGACAGTTACATGCCGGGTGCTGTCTTCTGAC
ACATTGAAGACCTTAAGTAACTTCCTAGAAGAGAATGATGATGCAGCGAATCAACATTTG
AGCCAAAAATGTTCGGGCTCTCAGCTCTCTCGGCTTGCTGAGAATATACTGCCTTCTCTA
TCCTATAGTGATTCTTCATTAGTTATTGCTGGACTTCATGCCTGTGGAGACCTCTCGGTG
ACAATGCTGAGGACATTCTTGGAATGTGACAAAGCTAAGGCGGTGATTAGCGTTGGTTGC
TGTTATAACTTGCTTTCTGAGGAAGCCAGTGACATGGTGGATTCTTGTTGTGGTTTTCCT
GTAAGCCAAGGTGTTAAATCTGCTGGAGTAGTGCTAGATAAAAATGCTCGTGATCTAGCT
TGTCAGAGTGCTGATAGATGGAGAGGCTTGGATGAGCACGCAGGGCTTCACAACTTTGAG
TTGCATGCATTCCGTGCTGCTTTCCAGATGGTTCTTTTCAGACATTACCCACACATATTG
CAAGAAAGCCCTACAATAGGACGTCAAGGGAAAGCCTTACGACGCCAACAGCATCAGAGG
ATCCTGGAGTCTAATTTGCATTATAGGGGCCCTTCAGAATATGGGGAACCACGGAAGAAT
GTGGCCTTTTTCCATGAGTACTCTTCTATTCAGAATTCTAAAAGCAGGGAGTCTAGCACT
GTGGACAGATACTCACTATTTGTAAAATTTTGTGAATCTGGGCTAGGTCGCCTACATCTT
CCTTGTTTGGAGGATATTGATTACAGTGCAGTCTGGAGGGAGTCTGAATCATATGCTTAA

Peptide Sequence

PEP ID

XP_016447015.1
PEP Infomation

PREDICTED: protein RRNAD1-like isoform X3 [Nicotiana tabacum]
Sequence

MAEKCKYSCKTASETLEWIHAIIHFISPYRYFLDAHVVNFFKDRLWEAVDKEWMHCLRKE
PVENLLRIPSGVVQGHWPVSLKEFILTLRSLSLPREKTDLQEFSGMHIASLSNVLAQGMN
HKKKHEVEALAALVGLVAKQVGAQTVVDVGAGQGYLAQVLAFEYQLSVIAIDACSHHGKI
TDARAERIRKHYAAKMRKNGSELREISMPKTVTCRVLSSDTLKTLSNFLEENDDAANQHL
SQKCSGSQLSRLAENILPSLSYSDSSLVIAGLHACGDLSVTMLRTFLECDKAKAVISVGC
CYNLLSEEASDMVDSCCGFPVSQGVKSAGVVLDKNARDLACQSADRWRGLDEHAGLHNFE
LHAFRAAFQMVLFRHYPHILQESPTIGRQGKALRRQQHQRILESNLHYRGPSEYGEPRKN
VAFFHEYSSIQNSKSRESSTVDRYSLFVKFCESGLGRLHLPCLEDIDYSAVWRESESYA

Transcript Sequence

Gene sequence data has not been registered.